Illumina NovaSeq 6000 paired end sequencing - SRA

ERX11595244: Illumina NovaSeq 6000 paired end sequencing
1 ILLUMINA (Illumina NovaSeq 6000) run: 534,573 spots, 161.4M bases, 33.8Mb downloads

Design: Illumina sequencing of library SQPP-1219-K:J16, constructed from sample accession ERS13368421 for study accession ERP138651. This is part of an Illumina multiplexed sequencing run (46118_2). This submission includes reads tagged with the sequence TGTGGAAG.

Submitted by: Wellcome Sanger Institute

Study: Critical_Enterobacteriaceae_MDR_pathogen_acquisition__persistence_and_onward_transmission_in_an_inter_continental_context

PRJEB53835 • ERP138651 • All experiments • All runs

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Colonisation of ESBL producing E. coli was screened from Finnish participants to the OEV123 vaccine trial in Benin during 2018-2019 and after return to Finland to establish dynamics of MDR-pathogen acquisition, persistence and onward transmission in an inter-continental context

Sample: MDRAPT12986833

SAMEA111270821 • ERS13368421 • All experiments • All runs

Organism: Escherichia coli

Library:

Name: SQPP-1219-K:J16

Instrument: Illumina NovaSeq 6000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: pWGS-384

Runs: 1 run, 534,573 spots, 161.4M bases, 33.8Mb

Run	# of Spots	# of Bases	Size	Published
ERR12184354	534,573	161.4M	33.8Mb	2024-07-20

ID:: 33881054

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